Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | DZF93_10135 | Not Available | Positive | 1854903 - 1855124 | 8378.36 |
| 50s ribosomal protein l36 | DZF93_10140 | Not Available | Positive | 1855197 - 1855310 | 4346.5 |
| 30s ribosomal protein s13 | DZF93_10145 | Not Available | Positive | 1855465 - 1855839 | 14014.0 |
| 30s ribosomal protein s11 | DZF93_10150 | Not Available | Positive | 1855884 - 1856282 | 13959.7 |
| dna-directed rna polymerase subunit alpha | DZF93_10155 | Not Available | Positive | 1856443 - 1857123 | 24713.4 |
| indole-3-glycerol phosphate synthase trpc | DZF93_10160 | Not Available | Positive | 1857124 - 1857843 | 25225.2 |
| tryptophan synthase subunit beta | DZF93_10165 | Not Available | Positive | 1857840 - 1859054 | 43173.2 |
| tryptophan synthase subunit alpha | DZF93_10170 | Not Available | Positive | 1859051 - 1859651 | 21059.0 |
| m50 family peptidase | DZF93_10175 | Not Available | Negative | 1859925 - 1861604 | 59379.2 |
| hypothetical protein | DZF93_10180 | Not Available | Negative | 1861601 - 1862062 | 16436.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
