Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_09920 | Not Available | Negative | 1819572 - 1820336 | 27255.2 |
| hypothetical protein | DZF93_09925 | Not Available | Positive | 1820580 - 1820900 | 11717.6 |
| hypothetical protein | DZF93_09930 | Not Available | Negative | 1820907 - 1821116 | 6804.66 |
| hypothetical protein | DZF93_09935 | Not Available | Negative | 1821151 - 1821350 | 6590.95 |
| 2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferase | DZF93_09940 | Not Available | Positive | 1821351 - 1822332 | 33660.2 |
| serine/threonine protein kinase | DZF93_09945 | Not Available | Negative | 1822359 - 1823888 | 52000.4 |
| glutamate abc transporter substrate-binding protein | DZF93_09950 | Not Available | Positive | 1823966 - 1824889 | 32145.6 |
| amino acid abc transporter permease | DZF93_09955 | Not Available | Positive | 1825008 - 1825655 | 22929.5 |
| amino acid abc transporter permease | DZF93_09960 | Not Available | Positive | 1825652 - 1826476 | 29572.7 |
| sensor histidine kinase | DZF93_09965 | Not Available | Negative | 1826526 - 1828160 | 59709.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
