Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazoleglycerol-phosphate dehydratase hisb | DZF93_09755 | Not Available | Negative | 1794393 - 1795001 | 21625.7 |
| lysm peptidoglycan-binding domain-containing protein | DZF93_09760 | Not Available | Negative | 1795112 - 1795416 | 10169.0 |
| amino acid permease | DZF93_09765 | Not Available | Negative | 1796384 - 1797781 | 49033.0 |
| mfs transporter | DZF93_09770 | Not Available | Positive | 1798027 - 1798630 | 19959.2 |
| lsr2 family protein | DZF93_09775 | Not Available | Negative | 1798692 - 1799039 | 12630.6 |
| hypothetical protein | DZF93_09780 | Not Available | Negative | 1799128 - 1799550 | 15376.9 |
| sodium:proton antiporter | DZF93_09790 | Not Available | Positive | 1800636 - 1800839 | 7306.61 |
| hypothetical protein | DZF93_09795 | Not Available | Positive | 1800875 - 1801171 | 11266.3 |
| alpha/beta hydrolase | DZF93_09800 | Not Available | Positive | 1801168 - 1801902 | 26013.1 |
| ai-2e family transporter | DZF93_09805 | Not Available | Negative | 1801918 - 1802976 | 37176.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
