Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DZF93_09490 | Not Available | Positive | 1750181 - 1750328 | 4617.43 |
| hypothetical protein | DZF93_09495 | Not Available | Negative | 1750366 - 1750734 | 13293.8 |
| gfo/idh/moca family oxidoreductase | DZF93_09500 | Not Available | Negative | 1750826 - 1751902 | 37494.4 |
| hypothetical protein | DZF93_09505 | Not Available | Negative | 1751920 - 1752618 | 25654.2 |
| 5-aminoimidazole-4-carboxamide ribonucleotide transformylase | DZF93_09510 | Not Available | Positive | 1752870 - 1753825 | 34000.3 |
| aminotransferase class v-fold plp-dependent enzyme | DZF93_09515 | Not Available | Positive | 1754030 - 1755555 | 54514.6 |
| deor/glpr transcriptional regulator | DZF93_09520 | Not Available | Positive | 1755556 - 1756177 | 21844.0 |
| 6-phospho-beta-glucosidase | DZF93_09525 | Not Available | Positive | 1756174 - 1757517 | 48448.7 |
| had-iia family hydrolase | DZF93_09535 | Not Available | Negative | 1758297 - 1759337 | 36005.6 |
| hypothetical protein | DZF93_09540 | Not Available | Negative | 1759327 - 1760286 | 34266.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
