Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | DZF93_08990 | Not Available | Positive | 1664021 - 1664887 | 30158.3 |
| abc transporter permease subunit | DZF93_08995 | Not Available | Positive | 1664887 - 1665702 | 29438.9 |
| abc transporter atp-binding protein | DZF93_09000 | Not Available | Positive | 1665710 - 1666855 | 40674.8 |
| hypothetical protein | DZF93_09005 | Not Available | Negative | 1666856 - 1667120 | 8797.12 |
| hypothetical protein | DZF93_09010 | Not Available | Negative | 1667143 - 1667541 | 13789.3 |
| duf2256 and duf3253 domain-containing protein | DZF93_09015 | Not Available | Negative | 1667559 - 1667957 | 14884.6 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DZF93_09025 | Not Available | Negative | 1669848 - 1672097 | 83253.6 |
| rhodanese-like domain-containing protein | DZF93_09030 | Not Available | Negative | 1672201 - 1672560 | 12485.5 |
| 30s ribosome-binding factor rbfa | DZF93_09035 | Not Available | Negative | 1672702 - 1673208 | 18373.2 |
| translation initiation factor if-2 | DZF93_09040 | Not Available | Negative | 1673388 - 1675481 | 74090.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
