Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_08605 | Not Available | Negative | 1599903 - 1600361 | 17190.6 |
| toxin component of a toxin/antitoxin system | DZF93_08610 | Not Available | Negative | 1600381 - 1601397 | 36596.9 |
| hypothetical protein | DZF93_08615 | Not Available | Negative | 1601400 - 1601858 | 17185.5 |
| methionine abc transporter substrate-binding protein | DZF93_08620 | Not Available | Positive | 1602065 - 1602976 | 31553.2 |
| methionine abc transporter atp-binding protein | DZF93_08625 | Not Available | Positive | 1602973 - 1604010 | 36918.3 |
| abc transporter permease subunit | DZF93_08630 | Not Available | Positive | 1604012 - 1604671 | 23126.4 |
| argp/lysg family dna-binding transcriptional regulator | DZF93_08635 | Not Available | Negative | 1604710 - 1605048 | 12107.5 |
| atp-dependent clp protease proteolytic subunit | DZF93_08640 | Not Available | Negative | 1605049 - 1605607 | 20231.2 |
| trigger factor | DZF93_08645 | Not Available | Negative | 1605806 - 1607257 | 52475.2 |
| Trna-pro | Not Available | Not Available | Positive | 1607323 - 1607398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
