Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-70 | DZF93_08360 | Not Available | Positive | 1556471 - 1556580 | 3731.51 |
| sdr family nad(p)-dependent oxidoreductase | DZF93_08365 | Not Available | Positive | 1556786 - 1557535 | 26342.9 |
| 3-hydroxyacyl-coa dehydrogenase family protein | DZF93_08370 | Not Available | Negative | 1557564 - 1558529 | 34217.6 |
| sugar phosphate isomerase/epimerase | DZF93_08375 | Not Available | Negative | 1558541 - 1559515 | 35863.2 |
| acetyltransferase | DZF93_08380 | Not Available | Negative | 1559645 - 1560214 | 20776.2 |
| glycosyltransferase wbub | DZF93_08385 | Not Available | Negative | 1560211 - 1561497 | 45530.1 |
| choline oxidase | DZF93_08400 | Not Available | Positive | 1564081 - 1565655 | 57552.6 |
| hypothetical protein | DZF93_08405 | Not Available | Negative | 1565764 - 1566769 | 36024.2 |
| tetr/acrr family transcriptional regulator | DZF93_08410 | Not Available | Positive | 1566824 - 1567459 | 24010.9 |
| laci family transcriptional regulator | DZF93_08415 | Not Available | Positive | 1567647 - 1567877 | 8348.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
