Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | DZF93_08260 | Not Available | Positive | 1540595 - 1541078 | 16949.6 |
| lysr family transcriptional regulator | DZF93_08265 | Not Available | Negative | 1541079 - 1541239 | 5411.49 |
| aminotransferase class v-fold plp-dependent enzyme | DZF93_08270 | Not Available | Positive | 1541321 - 1542376 | 36690.6 |
| bcr/cfla family efflux mfs transporter | DZF93_08275 | Not Available | Positive | 1542507 - 1543742 | 43077.0 |
| duf1624 domain-containing protein | DZF93_08280 | Not Available | Positive | 1543783 - 1544211 | 15096.0 |
| hypothetical protein | DZF93_08285 | Not Available | Negative | 1544212 - 1544380 | 5616.77 |
| copper chaperone | DZF93_08290 | Not Available | Negative | 1544382 - 1544597 | 7123.36 |
| metal-sensitive transcriptional regulator | DZF93_08295 | Not Available | Negative | 1544642 - 1544923 | 10200.2 |
| phosphomannomutase/phosphoglucomutase | DZF93_08300 | Not Available | Negative | 1545073 - 1546500 | 50151.3 |
| duf3499 family protein | DZF93_08305 | Not Available | Negative | 1546497 - 1546718 | 7747.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
