Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_08210 | Not Available | Negative | 1534047 - 1534271 | 7999.29 |
| laci family transcriptional regulator | DZF93_08215 | Not Available | Negative | 1534327 - 1534790 | 16297.3 |
| sdr family nad(p)-dependent oxidoreductase | DZF93_08220 | Not Available | Negative | 1534791 - 1534984 | 6582.81 |
| hypothetical protein | DZF93_08225 | Not Available | Positive | 1535122 - 1535472 | 13399.0 |
| hsp20/alpha crystallin family protein | DZF93_08230 | Not Available | Positive | 1535608 - 1536066 | 16665.7 |
| siderophore biosynthesis protein | DZF93_08235 | Not Available | Negative | 1536159 - 1537934 | 65782.6 |
| hit family hydrolase | DZF93_08240 | Not Available | Positive | 1537935 - 1538163 | 8020.6 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | DZF93_08245 | Not Available | Positive | 1538177 - 1539079 | 31450.8 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | DZF93_08250 | Not Available | Positive | 1539069 - 1539698 | 21696.2 |
| yebc/pmpr family dna-binding transcriptional regulator | DZF93_08255 | Not Available | Positive | 1539776 - 1540543 | 27419.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
