Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DZF93_07620 | Not Available | Positive | 1435530 - 1436654 | 39808.2 |
| 3-oxoacyl-acp synthase iii | DZF93_07625 | Not Available | Positive | 1436762 - 1437793 | 36812.0 |
| sugar abc transporter substrate-binding protein | DZF93_07630 | Not Available | Negative | 1438023 - 1439366 | 47149.7 |
| llm class flavin-dependent oxidoreductase | DZF93_07635 | Not Available | Positive | 1439641 - 1441083 | 52259.1 |
| streptomycin phosphotransferase | DZF93_07640 | Not Available | Negative | 1441201 - 1441422 | 7936.58 |
| hypothetical protein | DZF93_07645 | Not Available | Negative | 1441419 - 1442069 | 22966.8 |
| hypothetical protein | DZF93_07650 | Not Available | Positive | 1443269 - 1443703 | 14767.2 |
| hypothetical protein | DZF93_07655 | Not Available | Positive | 1443724 - 1443933 | 7741.61 |
| Trna-ser | Not Available | Not Available | Positive | 1444022 - 1444109 | Not Available |
| luxr family transcriptional regulator | DZF93_07665 | Not Available | Negative | 1444155 - 1444489 | 11369.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
