Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | DZF93_06915 | Not Available | Positive | 1314323 - 1315956 | 55643.3 |
| lpxtg cell wall anchor domain-containing protein | DZF93_06930 | Not Available | Negative | 1317821 - 1317913 | 2997.86 |
| extracellular solute-binding protein | DZF93_06940 | Not Available | Negative | 1319186 - 1320538 | 47768.2 |
| carbohydrate abc transporter permease | DZF93_06945 | Not Available | Negative | 1320598 - 1321425 | 30037.1 |
| trna(ile)-lysidine synthetase | DZF93_06950 | Not Available | Positive | 1321504 - 1321823 | 11649.8 |
| hypoxanthine phosphoribosyltransferase | DZF93_06955 | Not Available | Positive | 1321825 - 1322376 | 20242.4 |
| atp-dependent zinc metalloprotease ftsh | DZF93_06960 | Not Available | Positive | 1322534 - 1324534 | 71637.9 |
| gtp cyclohydrolase i | DZF93_06965 | Not Available | Positive | 1324539 - 1325073 | 18774.6 |
| ycei family protein | DZF93_06970 | Not Available | Positive | 1325257 - 1325949 | 23211.2 |
| nuclear transport factor 2 family protein | DZF93_06975 | Not Available | Negative | 1326037 - 1326447 | 14440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
