Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_06705 | Not Available | Negative | 1277746 - 1278087 | 12501.0 |
| n-acetyltransferase | DZF93_06710 | Not Available | Negative | 1278185 - 1278853 | 24909.8 |
| utp--glucose-1-phosphate uridylyltransferase | DZF93_06715 | Not Available | Negative | 1278911 - 1279807 | 32700.4 |
| 5-formyltetrahydrofolate cyclo-ligase | DZF93_06720 | Not Available | Positive | 1279848 - 1280423 | 21127.1 |
| fmdb family transcriptional regulator | DZF93_06725 | Not Available | Positive | 1280430 - 1280840 | 13188.5 |
| large conductance mechanosensitive channel protein mscl | DZF93_06730 | Not Available | Positive | 1280869 - 1281351 | 16598.4 |
| polysaccharide biosynthesis tyrosine autokinase | DZF93_06735 | Not Available | Negative | 1281778 - 1283172 | 48854.8 |
| thymidine kinase | DZF93_06740 | Not Available | Negative | 1283530 - 1284204 | 24732.6 |
| dna-binding response regulator | DZF93_06745 | Not Available | Negative | 1284205 - 1284915 | 25304.2 |
| trna dihydrouridine synthase dusb | DZF93_06750 | Not Available | Positive | 1285179 - 1286321 | 40697.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
