Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_06600 | Not Available | Negative | 1257392 - 1258048 | 23877.7 |
| s9 family peptidase | DZF93_06605 | Not Available | Negative | 1259208 - 1261265 | 74696.6 |
| hnh endonuclease | DZF93_06610 | Not Available | Negative | 1261297 - 1261794 | 18117.9 |
| peptidoglycan endopeptidase | DZF93_06615 | Not Available | Negative | 1262153 - 1262937 | 26872.3 |
| nad-dependent epimerase/dehydratase family protein | DZF93_06620 | Not Available | Positive | 1262938 - 1263504 | 20073.4 |
| glucose-1-phosphate thymidylyltransferase | DZF93_06625 | Not Available | Negative | 1263530 - 1264393 | 31650.9 |
| dtdp-4-keto-6-deoxy-d-glucose epimerase | DZF93_06630 | Not Available | Negative | 1264397 - 1265002 | 22077.0 |
| gtra family protein | DZF93_06635 | Not Available | Negative | 1265028 - 1265480 | 16071.2 |
| hnh endonuclease | DZF93_06645 | Not Available | Positive | 1266651 - 1267281 | 22490.8 |
| hypothetical protein | DZF93_06650 | Not Available | Positive | 1267419 - 1268948 | 55076.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
