Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp23/gls24 family envelope stress response protein | DZF93_06440 | Not Available | Negative | 1232061 - 1232741 | 23166.2 |
| sortase | DZF93_06445 | Not Available | Negative | 1232773 - 1233069 | 9579.54 |
| sortase | DZF93_06450 | Not Available | Negative | 1233340 - 1233924 | 18682.1 |
| duf4012 domain-containing protein | DZF93_06455 | Not Available | Negative | 1234012 - 1235832 | 63675.6 |
| hypothetical protein | DZF93_06460 | Not Available | Negative | 1235829 - 1236571 | 24285.2 |
| doxx family protein | DZF93_06465 | Not Available | Positive | 1236738 - 1237337 | 20963.8 |
| imma/irre family metallo-endopeptidase | DZF93_06470 | Not Available | Positive | 1237651 - 1238808 | 42631.8 |
| dna-binding response regulator | DZF93_06480 | Not Available | Negative | 1240039 - 1240362 | 11543.2 |
| mmpl family transporter | DZF93_06485 | Not Available | Negative | 1240363 - 1240650 | 9803.85 |
| tetr/acrr family transcriptional regulator | DZF93_06490 | Not Available | Negative | 1240724 - 1241302 | 20825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
