Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DZF93_06285 | Not Available | Positive | 1205842 - 1206940 | 37990.7 |
| abc transporter permease | DZF93_06290 | Not Available | Positive | 1206937 - 1208241 | 44930.9 |
| cytidine deaminase | DZF93_06295 | Not Available | Positive | 1208238 - 1208669 | 14790.8 |
| thymidine phosphorylase | DZF93_06300 | Not Available | Positive | 1208666 - 1209722 | 36883.4 |
| hydantoinase/oxoprolinase family protein | DZF93_06305 | Not Available | Negative | 1209723 - 1210027 | 10667.7 |
| hypothetical protein | DZF93_06315 | Not Available | Positive | 1211557 - 1212159 | 21721.4 |
| llm class flavin-dependent oxidoreductase | DZF93_06320 | Not Available | Negative | 1212182 - 1213378 | 41299.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DZF93_06325 | Not Available | Negative | 1213599 - 1214195 | 21197.4 |
| molecular chaperone dnaj | DZF93_06330 | Not Available | Negative | 1214198 - 1215313 | 40117.5 |
| heat-inducible transcriptional repressor hrca | DZF93_06335 | Not Available | Negative | 1215374 - 1216396 | 36627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
