Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | DZF93_06015 | Not Available | Negative | 1157612 - 1158397 | 27977.7 |
| hypothetical protein | DZF93_06020 | Not Available | Positive | 1158398 - 1158613 | 7299.65 |
| hypothetical protein | DZF93_06025 | Not Available | Positive | 1158618 - 1159391 | 27347.1 |
| hypothetical protein | DZF93_06045 | Not Available | Positive | 1161419 - 1161997 | 21441.4 |
| hypothetical protein | DZF93_06050 | Not Available | Positive | 1161994 - 1162311 | 10786.4 |
| allophanate hydrolase | DZF93_06055 | Not Available | Negative | 1162376 - 1162800 | 14832.9 |
| lamb/ycsf family protein | DZF93_06060 | Not Available | Negative | 1162797 - 1163609 | 28196.6 |
| aspartate--trna(asn) ligase | DZF93_06065 | Not Available | Positive | 1163722 - 1165032 | 48786.8 |
| hypothetical protein | DZF93_06075 | Not Available | Positive | 1166353 - 1166821 | 15969.3 |
| mfs transporter | DZF93_06080 | Not Available | Negative | 1166870 - 1168273 | 48010.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
