Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DZF93_05860 | Not Available | Positive | 1132930 - 1133439 | 17014.9 |
| dyp-type peroxidase | DZF93_05865 | Not Available | Negative | 1133480 - 1134298 | 29470.6 |
| alpha/beta fold hydrolase | DZF93_05870 | Not Available | Negative | 1134299 - 1134906 | 20912.2 |
| type ii toxin-antitoxin system hipa family toxin | DZF93_05875 | Not Available | Negative | 1134984 - 1136183 | 43399.2 |
| xre family transcriptional regulator | DZF93_05880 | Not Available | Negative | 1136176 - 1136481 | 11086.9 |
| dha2 family efflux mfs transporter permease subunit | DZF93_05885 | Not Available | Negative | 1136600 - 1138024 | 49616.9 |
| tetr family transcriptional regulator | DZF93_05890 | Not Available | Positive | 1138141 - 1138349 | 6849.83 |
| mfs transporter | DZF93_05895 | Not Available | Positive | 1138350 - 1138674 | 10628.1 |
| duf3892 domain-containing protein | DZF93_05900 | Not Available | Positive | 1138990 - 1139253 | 9749.25 |
| gmc family oxidoreductase | DZF93_05905 | Not Available | Positive | 1139573 - 1141336 | 63286.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
