Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter michiganensis |
| Strain | subsp. insidiosus strain CFBP 6488 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Medicago sativa |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
448911 bp
Thymine Count
446878 bp
Guanine Count
1163632 bp
Cytosine Count
1166114 bp
Genome Length
3225538 bp
Protein-coding Genes
3890 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | DZF93_05450 | Not Available | Positive | 1059571 - 1060903 | 46688.8 |
| hypothetical protein | DZF93_05455 | Not Available | Negative | 1061036 - 1061911 | 31092.0 |
| hypothetical protein | DZF93_05460 | Not Available | Negative | 1062289 - 1062693 | 14671.2 |
| flavodoxin family protein | DZF93_05465 | Not Available | Positive | 1062952 - 1063548 | 21153.8 |
| hypothetical protein | DZF93_05470 | Not Available | Positive | 1063622 - 1063844 | 7910.12 |
| cgnr zinc finger domain-containing protein | DZF93_05475 | Not Available | Positive | 1063845 - 1064160 | 11289.6 |
| gnat family n-acetyltransferase | DZF93_05480 | Not Available | Negative | 1064173 - 1065069 | 32811.9 |
| had family hydrolase | DZF93_05485 | Not Available | Positive | 1065177 - 1065881 | 25122.1 |
| hypothetical protein | DZF93_05490 | Not Available | Positive | 1065932 - 1066351 | 14555.3 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DZF93_05495 | Not Available | Negative | 1066385 - 1067323 | 32093.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
