Anaerotruncus colihominis strain TF05-12AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Anaerotruncus

Description

Anaerotruncus colihominis strain TF05-12AC is a bacterium primarily found in the caeca, feces, and rectal mucosa of its host, Homo sapiens. It has a single replicon, indicating a simplified genomic structure. The strain's ecological niche suggests a role in the gastrointestinal microbiome, where it likely contributes to the fermentation processes and overall digestive health of humans. The presence of Anaerotruncus colihominis in fecal matter and rectal mucosa highlights its significance in the gut environment, potentially influencing gut health and microbial balance. Its isolation from these specific habitats implies that it may interact with various substrates, including dietary fibers and undigested materials, which could have implications for nutrient absorption and metabolism. This strain is cataloged under accession number QVME00000000.1, providing a reference for further genomic and functional studies. Understanding the traits and habitats of Anaerotruncus colihominis can enhance our knowledge of gut microbiota dynamics and their influence on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusAnaerotruncus
SpeciesAnaerotruncus colihominis
Strainstrain TF05-12AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; feces; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerotruncus colihominis strain TF05-12AC TF05-12AC.Scaf21, whole

Gene Summary

Adenine Count

822448 bp

Thymine Count

824840 bp

Guanine Count

961899 bp

Cytosine Count

1007163 bp

Genome Length

3617395 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinDXC40_01570Not AvailableNegative334116 - 33530642554.3
efflux rnd transporter periplasmic adaptor subunitDXC40_01575Not AvailableNegative335313 - 33645840892.9
hypothetical proteinDXC40_01580Not AvailablePositive336658 - 3368376900.03
dna repair protein radaDXC40_01585Not AvailableNegative336811 - 33821750430.1
hypothetical proteinDXC40_01590Not AvailableNegative338283 - 33985160176.9
mboat family proteinDXC40_01595Not AvailableNegative339863 - 34127854474.7
n-acetylmuramoyl-l-alanine amidaseDXC40_01600Not AvailablePositive341923 - 34271129099.8
sn-glycerol-3-phosphate abc transporter atp-binding protein ugpcDXC40_01605Not AvailableNegative342876 - 34399441673.5
n-acetylneuraminate lyaseDXC40_01610Not AvailableNegative344219 - 34513332689.5
carbohydrate abc transporter permeaseDXC40_01615Not AvailableNegative345196 - 34608032320.6

Displaying genes 401 – 410 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.