Anaerotruncus colihominis strain TF05-12AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Anaerotruncus

Description

Anaerotruncus colihominis strain TF05-12AC is a bacterium primarily found in the caeca, feces, and rectal mucosa of its host, Homo sapiens. It has a single replicon, indicating a simplified genomic structure. The strain's ecological niche suggests a role in the gastrointestinal microbiome, where it likely contributes to the fermentation processes and overall digestive health of humans. The presence of Anaerotruncus colihominis in fecal matter and rectal mucosa highlights its significance in the gut environment, potentially influencing gut health and microbial balance. Its isolation from these specific habitats implies that it may interact with various substrates, including dietary fibers and undigested materials, which could have implications for nutrient absorption and metabolism. This strain is cataloged under accession number QVME00000000.1, providing a reference for further genomic and functional studies. Understanding the traits and habitats of Anaerotruncus colihominis can enhance our knowledge of gut microbiota dynamics and their influence on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusAnaerotruncus
SpeciesAnaerotruncus colihominis
Strainstrain TF05-12AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; feces; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerotruncus colihominis strain TF05-12AC TF05-12AC.Scaf21, whole

Gene Summary

Adenine Count

822448 bp

Thymine Count

824840 bp

Guanine Count

961899 bp

Cytosine Count

1007163 bp

Genome Length

3617395 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ump kinaseDXC40_01420Not AvailablePositive304557 - 30527925968.3
ribosome recycling factorDXC40_01425Not AvailablePositive305272 - 30582621164.5
isoprenyl transferaseDXC40_01430Not AvailablePositive306077 - 30680527390.5
hypothetical proteinDXC40_01435Not AvailablePositive306822 - 30768831806.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDXC40_01440Not AvailablePositive307712 - 30886941446.4
rip metalloprotease rsepDXC40_01445Not AvailablePositive308959 - 30998437375.4
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDXC40_01450Not AvailablePositive310010 - 31109838276.6
polc-type dna polymerase iiiDXC40_01455Not AvailablePositive311104 - 315441160664.0
atp phosphoribosyltransferase regulatory subunitDXC40_01460Not AvailablePositive315531 - 31674245108.7
atp phosphoribosyltransferaseDXC40_01465Not AvailablePositive316739 - 31738623625.8

Displaying genes 371 – 380 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.