Anaerotruncus colihominis strain TF05-12AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Anaerotruncus

Description

Anaerotruncus colihominis strain TF05-12AC is a bacterium primarily found in the caeca, feces, and rectal mucosa of its host, Homo sapiens. It has a single replicon, indicating a simplified genomic structure. The strain's ecological niche suggests a role in the gastrointestinal microbiome, where it likely contributes to the fermentation processes and overall digestive health of humans. The presence of Anaerotruncus colihominis in fecal matter and rectal mucosa highlights its significance in the gut environment, potentially influencing gut health and microbial balance. Its isolation from these specific habitats implies that it may interact with various substrates, including dietary fibers and undigested materials, which could have implications for nutrient absorption and metabolism. This strain is cataloged under accession number QVME00000000.1, providing a reference for further genomic and functional studies. Understanding the traits and habitats of Anaerotruncus colihominis can enhance our knowledge of gut microbiota dynamics and their influence on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusAnaerotruncus
SpeciesAnaerotruncus colihominis
Strainstrain TF05-12AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; feces; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerotruncus colihominis strain TF05-12AC TF05-12AC.Scaf21, whole

Gene Summary

Adenine Count

822448 bp

Thymine Count

824840 bp

Guanine Count

961899 bp

Cytosine Count

1007163 bp

Genome Length

3617395 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s20DXC40_14160Not AvailablePositive2818487 - 28187509099.44
hypothetical proteinDXC40_14165Not AvailablePositive2818911 - 28191057609.12
hypothetical proteinDXC40_14170Not AvailablePositive2819116 - 281972121192.4
hypothetical proteinDXC40_14175Not AvailablePositive2819782 - 28200278994.08
duf4445 domain-containing proteinDXC40_14185Not AvailableNegative2820441 - 282196751856.6
phosphatase pap2 family proteinDXC40_14190Not AvailableNegative2821988 - 282250018581.3
phosphomannomutase/phosphoglucomutaseDXC40_14195Not AvailablePositive2822757 - 282431956641.7
glycine--trna ligaseDXC40_14200Not AvailablePositive2824792 - 282618653223.1
xre family transcriptional regulatorDXC40_14205Not AvailableNegative2826236 - 28264608766.66
hypothetical proteinDXC40_14210Not AvailablePositive2826551 - 28267999495.57

Displaying genes 2811 – 2820 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.