Anaerotruncus colihominis strain TF05-12AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Anaerotruncus

Description

Anaerotruncus colihominis strain TF05-12AC is a bacterium primarily found in the caeca, feces, and rectal mucosa of its host, Homo sapiens. It has a single replicon, indicating a simplified genomic structure. The strain's ecological niche suggests a role in the gastrointestinal microbiome, where it likely contributes to the fermentation processes and overall digestive health of humans. The presence of Anaerotruncus colihominis in fecal matter and rectal mucosa highlights its significance in the gut environment, potentially influencing gut health and microbial balance. Its isolation from these specific habitats implies that it may interact with various substrates, including dietary fibers and undigested materials, which could have implications for nutrient absorption and metabolism. This strain is cataloged under accession number QVME00000000.1, providing a reference for further genomic and functional studies. Understanding the traits and habitats of Anaerotruncus colihominis can enhance our knowledge of gut microbiota dynamics and their influence on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusAnaerotruncus
SpeciesAnaerotruncus colihominis
Strainstrain TF05-12AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; feces; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerotruncus colihominis strain TF05-12AC TF05-12AC.Scaf21, whole

Gene Summary

Adenine Count

822448 bp

Thymine Count

824840 bp

Guanine Count

961899 bp

Cytosine Count

1007163 bp

Genome Length

3617395 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDXC40_08280Not AvailableNegative1705007 - 170539314637.7
metal-dependent transcriptional regulatorDXC40_08285Not AvailablePositive1706046 - 170643514603.3
zip family metal transporterDXC40_08290Not AvailablePositive1706742 - 170753927440.1
atp-binding cassette domain-containing proteinDXC40_08295Not AvailablePositive1707585 - 170831325986.6
sufd family fe-s cluster assembly proteinDXC40_08300Not AvailablePositive1708306 - 170922332758.1
n-acetyltransferaseDXC40_08305Not AvailablePositive1709220 - 170975320240.5
hypothetical proteinDXC40_08310Not AvailablePositive1709937 - 171039816139.6
lpxtg cell wall anchor domain-containing proteinDXC40_08315Not AvailableNegative1710826 - 171206744942.5
mate family efflux transporterDXC40_08320Not AvailableNegative1712295 - 171364749089.5
l-serine ammonia-lyase, iron-sulfur-dependent, subunit alphaDXC40_08325Not AvailableNegative1713873 - 171475429673.2

Displaying genes 1721 – 1730 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.