Anaerotruncus colihominis strain TF05-12AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Anaerotruncus

Description

Anaerotruncus colihominis strain TF05-12AC is a bacterium primarily found in the caeca, feces, and rectal mucosa of its host, Homo sapiens. It has a single replicon, indicating a simplified genomic structure. The strain's ecological niche suggests a role in the gastrointestinal microbiome, where it likely contributes to the fermentation processes and overall digestive health of humans. The presence of Anaerotruncus colihominis in fecal matter and rectal mucosa highlights its significance in the gut environment, potentially influencing gut health and microbial balance. Its isolation from these specific habitats implies that it may interact with various substrates, including dietary fibers and undigested materials, which could have implications for nutrient absorption and metabolism. This strain is cataloged under accession number QVME00000000.1, providing a reference for further genomic and functional studies. Understanding the traits and habitats of Anaerotruncus colihominis can enhance our knowledge of gut microbiota dynamics and their influence on human health.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusAnaerotruncus
SpeciesAnaerotruncus colihominis
Strainstrain TF05-12AC

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcaeca; feces; rectal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerotruncus colihominis strain TF05-12AC TF05-12AC.Scaf21, whole

Gene Summary

Adenine Count

822448 bp

Thymine Count

824840 bp

Guanine Count

961899 bp

Cytosine Count

1007163 bp

Genome Length

3617395 bp

Protein-coding Genes

3429 genes

Non-Coding Genes

122 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycogen synthase glgaDXC40_05545Not AvailableNegative1119936 - 112136954258.4
glucose-1-phosphate adenylyltransferase subunit glgdDXC40_05550Not AvailableNegative1121485 - 112260941561.6
glucose-1-phosphate adenylyltransferaseDXC40_05555Not AvailableNegative1122614 - 112387646522.6
1,4-alpha-glucan branching protein glgbDXC40_05560Not AvailableNegative1123931 - 112594977664.1
type i glyceraldehyde-3-phosphate dehydrogenaseDXC40_05565Not AvailableNegative1126350 - 112736336143.3
sensor histidine kinaseDXC40_05570Not AvailablePositive1127694 - 112885141536.9
methionine--trna ligaseDXC40_05575Not AvailablePositive1129248 - 113132077183.9
tatd family deoxyribonucleaseDXC40_05580Not AvailablePositive1131469 - 113223328141.5
peptidaseDXC40_05585Not AvailablePositive1132268 - 113427172560.8
gnat family n-acetyltransferaseDXC40_05590Not AvailablePositive1134557 - 113518624941.1

Displaying genes 1181 – 1190 of 3551 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.