Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DY262_02775 | Not Available | Negative | 589996 - 590937 | 34398.8 |
| class i sam-dependent methyltransferase | DY262_02780 | Not Available | Negative | 591002 - 591676 | 25104.8 |
| gfo/idh/moca family oxidoreductase | DY262_02785 | Not Available | Negative | 591714 - 592682 | 35338.3 |
| protocatechuate 3,4-dioxygenase | DY262_02790 | Not Available | Negative | 592683 - 593537 | 31111.2 |
| protocatechuate 4,5-dioxygenase subunit alpha | DY262_02795 | Not Available | Negative | 593539 - 593982 | 16722.8 |
| 2-pyrone-4,6-dicarboxylate hydrolase | DY262_02800 | Not Available | Negative | 593984 - 594916 | 34896.6 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | DY262_02805 | Not Available | Negative | 594926 - 595609 | 23951.2 |
| amidohydrolase | DY262_02810 | Not Available | Negative | 595674 - 596708 | 38531.3 |
| abc transporter substrate-binding protein | DY262_02815 | Not Available | Negative | 596750 - 597436 | 23010.9 |
| lysr family transcriptional regulator | DY262_02820 | Not Available | Positive | 597560 - 598465 | 32625.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
