Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03087 family pep-cterm/xrta system glycosyltransferase | DY262_02570 | Not Available | Negative | 541245 - 542453 | 45066.0 |
| femab family pep-cterm system-associated protein | DY262_02575 | Not Available | Negative | 542464 - 543501 | 39353.8 |
| duf3473 domain-containing protein | DY262_02580 | Not Available | Negative | 543512 - 544378 | 33220.4 |
| atpase | DY262_02585 | Not Available | Negative | 544401 - 545549 | 42037.6 |
| tigr03016 family pep-cterm system-associated outer membrane protein | DY262_02590 | Not Available | Negative | 545553 - 547085 | 56241.9 |
| tyrosine-protein kinase family protein | DY262_02595 | Not Available | Negative | 547164 - 548078 | 32723.7 |
| chain length-determining protein | DY262_02600 | Not Available | Negative | 548094 - 549662 | 57927.2 |
| sugar abc transporter substrate-binding protein | DY262_02605 | Not Available | Negative | 549732 - 550319 | 20509.7 |
| aspartate/tyrosine/aromatic aminotransferase | DY262_02610 | Not Available | Positive | 550616 - 551812 | 42528.4 |
| 4,5-dopa dioxygenase extradiol | DY262_02615 | Not Available | Negative | 551894 - 552706 | 30006.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
