Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | DY262_20550 | Not Available | Negative | 4397982 - 4398575 | 21323.3 |
| trap transporter substrate-binding protein | DY262_20555 | Not Available | Negative | 4398581 - 4399780 | 43795.6 |
| hydroxylase | DY262_20560 | Not Available | Negative | 4399865 - 4400317 | 17167.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | DY262_20565 | Not Available | Negative | 4400332 - 4401552 | 46663.1 |
| iclr family transcriptional regulator | DY262_20570 | Not Available | Negative | 4401577 - 4402485 | 32791.3 |
| aaa family atpase | DY262_20575 | Not Available | Negative | 4403309 - 4404946 | 59421.7 |
| hypothetical protein | DY262_20580 | Not Available | Negative | 4404964 - 4407039 | 74416.9 |
| hypothetical protein | DY262_20590 | Not Available | Negative | 4408796 - 4409056 | 9754.77 |
| xre family transcriptional regulator | DY262_20595 | Not Available | Positive | 4409208 - 4409423 | 8246.94 |
| xre family transcriptional regulator | DY262_20600 | Not Available | Negative | 4413714 - 4414157 | 16444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
