Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | DY262_00125 | Not Available | Negative | 25899 - 27080 | 43052.9 |
| cysb family hth-type transcriptional regulator | DY262_00130 | Not Available | Negative | 27091 - 28035 | 35175.7 |
| cobalamin biosynthesis protein cbix | DY262_00135 | Not Available | Negative | 28032 - 28397 | 13178.1 |
| lps export abc transporter permease lptg | DY262_00140 | Not Available | Negative | 28400 - 29518 | 41608.7 |
| lps export abc transporter permease lptf | DY262_00145 | Not Available | Negative | 29515 - 30621 | 41329.4 |
| leucyl aminopeptidase | DY262_00150 | Not Available | Positive | 30649 - 32148 | 51422.2 |
| dna polymerase iii subunit chi | DY262_00155 | Not Available | Positive | 32163 - 32594 | 16120.1 |
| branched-chain amino acid abc transporter substrate-binding protein | DY262_00160 | Not Available | Positive | 32758 - 33957 | 41236.4 |
| glutathione peroxidase | DY262_00165 | Not Available | Negative | 34024 - 34587 | 20470.8 |
| aec family transporter | DY262_00170 | Not Available | Negative | 34655 - 35569 | 32328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
