Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | DY262_01625 | Not Available | Negative | 332349 - 334307 | 71955.3 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | DY262_01630 | Not Available | Negative | 334304 - 335173 | 30871.8 |
| succinyl-diaminopimelate desuccinylase | DY262_01635 | Not Available | Negative | 335182 - 336354 | 41851.8 |
| pilt/pilu family type 4a pilus atpase | DY262_01640 | Not Available | Negative | 336354 - 337514 | 42188.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DY262_01645 | Not Available | Negative | 337550 - 338383 | 29631.6 |
| succinyldiaminopimelate transaminase | DY262_01650 | Not Available | Negative | 338443 - 339663 | 44139.7 |
| histidine kinase | DY262_01655 | Not Available | Negative | 339715 - 340476 | 26941.6 |
| chromosome segregation protein smc | DY262_01660 | Not Available | Positive | 340710 - 344228 | 129090.0 |
| cell division protein ftsz | DY262_01665 | Not Available | Positive | 344242 - 345393 | 40178.4 |
| nad-dependent dna ligase liga | DY262_01670 | Not Available | Positive | 345399 - 347498 | 76715.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
