Hydrogenophaga borbori strain LA-38

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga borbori strain LA-38 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a single replicon, indicating a streamlined genomic structure. The accession number for this strain is QVLS00000000.1, which provides a reference for researchers interested in its genetic and functional attributes. The classification of Hydrogenophaga borbori within the broader context of microbial ecology highlights its potential roles in various environments. Gram-negative bacteria, such as this strain, are known for their diverse metabolic capabilities and can inhabit a range of ecological niches. The presence of a single replicon suggests a potential for efficient replication and adaptation in its environment, which could be advantageous in competitive microbial communities. Overall, the traits of Hydrogenophaga borbori strain LA-38 indicate it is a well-adapted organism, likely contributing to biogeochemical cycles, particularly in environments where hydrogen and other electron donors are present. Its specific metabolic pathways and ecological interactions would be areas of further study to uncover its role in microbial dynamics and environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga borbori
Strainstrain LA-38

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga borbori strain LA-38 contig_37, whole genome

Gene Summary

Adenine Count

681465 bp

Thymine Count

690736 bp

Guanine Count

1613629 bp

Cytosine Count

1597204 bp

Genome Length

4583034 bp

Protein-coding Genes

4200 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lateral flagellinDY262_14920Not AvailablePositive3182706 - 318359930830.3
hypothetical proteinDY262_14925Not AvailablePositive3183724 - 318472235682.5
hypothetical proteinDY262_14930Not AvailableNegative3185019 - 318553317658.9
hamp domain-containing proteinDY262_14935Not AvailableNegative3185534 - 318666840794.7
flagellar biosynthesis protein flhaDY262_14940Not AvailableNegative3186714 - 318880174049.3
flagellar type iii secretion system protein flhbDY262_14945Not AvailableNegative3188798 - 318993741934.7
flagellar biosynthetic protein flirDY262_14950Not AvailableNegative3189941 - 319071127323.0
flagellar biosynthetic protein fliqDY262_14955Not AvailableNegative3190728 - 31909979640.29
flagellar biosynthetic protein flipDY262_14960Not AvailableNegative3191008 - 319181128362.7
flagellar motor switch protein flinDY262_14965Not AvailableNegative3191808 - 319220313184.8

Displaying genes 2961 – 2970 of 4254 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.