Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaa regulatory inactivator hda | DY262_13660 | Not Available | Positive | 2909863 - 2910549 | 25619.8 |
| had-ib family hydrolase | DY262_13665 | Not Available | Positive | 2910564 - 2911232 | 24895.4 |
| polynucleotide adenylyltransferase pcnb | DY262_13670 | Not Available | Positive | 2911229 - 2912890 | 61326.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DY262_13675 | Not Available | Positive | 2912877 - 2913353 | 16894.2 |
| pyridoxamine 5'-phosphate oxidase | DY262_13680 | Not Available | Negative | 2913360 - 2913992 | 24091.4 |
| gamma-glutamylcyclotransferase | DY262_13685 | Not Available | Negative | 2914018 - 2914620 | 22821.3 |
| ompa family protein | DY262_13690 | Not Available | Positive | 2914678 - 2915190 | 16937.3 |
| lactoylglutathione lyase | DY262_13695 | Not Available | Negative | 2915255 - 2915668 | 15066.0 |
| paai family thioesterase | DY262_13700 | Not Available | Negative | 2915680 - 2916222 | 18999.2 |
| marr family transcriptional regulator | DY262_13705 | Not Available | Positive | 2916263 - 2916739 | 17070.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
