Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DY262_00670 | Not Available | Positive | 132843 - 134030 | 42134.5 |
| rip metalloprotease rsep | DY262_00675 | Not Available | Positive | 134076 - 135458 | 49376.2 |
| outer membrane protein assembly factor bama | DY262_00680 | Not Available | Positive | 135436 - 137793 | 87531.3 |
| omph family outer membrane protein | DY262_00685 | Not Available | Positive | 137793 - 138323 | 20081.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DY262_00690 | Not Available | Positive | 138333 - 139385 | 36289.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DY262_00695 | Not Available | Positive | 139382 - 139822 | 16355.3 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DY262_00700 | Not Available | Positive | 139901 - 140695 | 28688.7 |
| lipid-a-disaccharide synthase | DY262_00705 | Not Available | Positive | 140733 - 141854 | 41350.2 |
| ribonuclease hii | DY262_00710 | Not Available | Positive | 141826 - 142512 | 24521.6 |
| rna methyltransferase | DY262_00715 | Not Available | Positive | 142509 - 143297 | 27479.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
