Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga borbori |
| Strain | strain LA-38 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
681465 bp
Thymine Count
690736 bp
Guanine Count
1613629 bp
Cytosine Count
1597204 bp
Genome Length
4583034 bp
Protein-coding Genes
4200 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthase | DY262_05600 | Not Available | Positive | 1251200 - 1253044 | 64914.2 |
| 2-hydroxychromene-2-carboxylate isomerase | DY262_05605 | Not Available | Negative | 1253051 - 1253767 | 25991.5 |
| c4-dicarboxylate abc transporter | DY262_05610 | Not Available | Positive | 1253830 - 1254870 | 37017.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | DY262_05615 | Not Available | Negative | 1254922 - 1256043 | 41663.0 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | DY262_05620 | Not Available | Positive | 1256205 - 1257296 | 40630.2 |
| gntr family transcriptional regulator | DY262_05625 | Not Available | Positive | 1257301 - 1258065 | 27303.9 |
| oxidoreductase | DY262_05630 | Not Available | Positive | 1258070 - 1259062 | 34993.9 |
| c4-dicarboxylate abc transporter | DY262_05635 | Not Available | Positive | 1259240 - 1260274 | 37222.2 |
| trap transporter small permease | DY262_05640 | Not Available | Positive | 1260390 - 1260908 | 18817.6 |
| trap transporter large permease | DY262_05645 | Not Available | Positive | 1260908 - 1262218 | 45415.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
