Lachnospiraceae bacterium AM25-39

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

Lachnospiraceae bacterium AM25-39 is a bacterium classified within the Lachnospiraceae family, known for its role in various ecological contexts, particularly in the human gut microbiome. This organism is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in nutrient utilization. The accession number for Lachnospiraceae bacterium AM25-39 is QVHF00000000.1, which serves as a reference for genetic and genomic studies. This identifier allows researchers to access genomic data pertinent to the organism, facilitating further investigation into its metabolic capabilities and potential interactions within microbial communities. The Lachnospiraceae family, to which AM25-39 belongs, is associated with the fermentation of dietary fibers and the production of short-chain fatty acids (SCFAs), which are important for host health. The presence of such bacteria in the gut microbiome is often linked to beneficial effects, including the modulation of inflammatory responses and support for gut barrier integrity. In summary, Lachnospiraceae bacterium AM25-39 exhibits a single replicon and is documented under the accession QVHF00000000.1. Given its classification and the known functions of related Lachnospiraceae members, it may play a significant role in gut health through fermentation processes and the production of SCFAs, highlighting its ecological importance within the human microbiome.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium AM25-39 AM25-39.Scaf62, whole genome

Gene Summary

Adenine Count

943652 bp

Thymine Count

958422 bp

Guanine Count

595371 bp

Cytosine Count

624527 bp

Genome Length

3122312 bp

Protein-coding Genes

2889 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toxin-antitoxin system proteinDW684_01260Not AvailablePositive262878 - 2631149026.53
tlpa family protein disulfide reductaseDW684_01265Not AvailableNegative263177 - 26407932452.4
4fe-4s binding proteinDW684_01270Not AvailableNegative264143 - 26502732322.9
thioredoxinDW684_01275Not AvailableNegative265020 - 2651634970.48
dna-binding response regulatorDW684_01280Not AvailablePositive265257 - 26593725782.1
sensor histidine kinaseDW684_01285Not AvailablePositive265934 - 26709143575.4
patatin family proteinDW684_01295Not AvailableNegative267954 - 26880232308.3
transcriptional regulator mrazDW684_01300Not AvailablePositive269122 - 26955316257.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDW684_01305Not AvailablePositive269572 - 27051335550.0
hypothetical proteinDW684_01310Not AvailablePositive270543 - 27102518397.8

Displaying genes 301 – 310 of 2995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.