Lachnospiraceae bacterium AM25-39

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Description

Lachnospiraceae bacterium AM25-39 is a bacterium classified within the Lachnospiraceae family, known for its role in various ecological contexts, particularly in the human gut microbiome. This organism is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in nutrient utilization. The accession number for Lachnospiraceae bacterium AM25-39 is QVHF00000000.1, which serves as a reference for genetic and genomic studies. This identifier allows researchers to access genomic data pertinent to the organism, facilitating further investigation into its metabolic capabilities and potential interactions within microbial communities. The Lachnospiraceae family, to which AM25-39 belongs, is associated with the fermentation of dietary fibers and the production of short-chain fatty acids (SCFAs), which are important for host health. The presence of such bacteria in the gut microbiome is often linked to beneficial effects, including the modulation of inflammatory responses and support for gut barrier integrity. In summary, Lachnospiraceae bacterium AM25-39 exhibits a single replicon and is documented under the accession QVHF00000000.1. Given its classification and the known functions of related Lachnospiraceae members, it may play a significant role in gut health through fermentation processes and the production of SCFAs, highlighting its ecological importance within the human microbiome.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lachnospiraceae bacterium AM25-39 AM25-39.Scaf62, whole genome

Gene Summary

Adenine Count

943652 bp

Thymine Count

958422 bp

Guanine Count

595371 bp

Cytosine Count

624527 bp

Genome Length

3122312 bp

Protein-coding Genes

2889 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sporulation integral membrane protein ytviDW684_04935Not AvailablePositive995238 - 99639543424.4
trka family potassium uptake proteinDW684_04940Not AvailablePositive996467 - 99711724176.0
formate--tetrahydrofolate ligaseDW684_04945Not AvailablePositive997438 - 99912360182.0
formate/nitrite transporter family proteinDW684_04950Not AvailablePositive999213 - 99997727017.8
peptidase s8DW684_04955Not AvailablePositive1000072 - 100181463700.9
cation diffusion facilitator family transporterDW684_04960Not AvailableNegative1001835 - 100277035391.1
8-oxoguanine dna glycosylaseDW684_04965Not AvailablePositive1002919 - 100373731875.6
tetr/acrr family transcriptional regulatorDW684_04970Not AvailablePositive1003857 - 100444422684.4
abc transporter atp-binding proteinDW684_04975Not AvailablePositive1004448 - 100515225493.0
abc transporter permeaseDW684_04980Not AvailablePositive1005166 - 1008549126466.0

Displaying genes 1001 – 1010 of 2995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.