Coprococcus sp. AF38-1

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Coprococcus

Description

Coprococcus sp. AF38-1 is a Gram-positive bacterium characterized by its cocci shape. It possesses flagella, which are structures that enable motility. This organism has a single replicon, indicating that it contains one circular DNA molecule that serves as its genetic blueprint. The genomic data for Coprococcus sp. AF38-1 can be accessed under the accession number QVGO00000000.1. Understanding the traits of Coprococcus sp. AF38-1 provides insight into its potential ecological roles. As a member of the Coprococcus genus, it is likely involved in the breakdown of complex carbohydrates within the gut microbiome. The presence of flagella may facilitate its movement in the gastrointestinal tract, allowing it to colonize specific niches and interact with other microorganisms. This motility can play a significant role in nutrient acquisition and in maintaining microbial diversity. Overall, the traits of Coprococcus sp. AF38-1 highlight its potential contributions to gut health and digestion, supporting the understanding of its ecological significance in microbial communities, particularly those associated with the human gastrointestinal system.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusCoprococcus
SpeciesCoprococcus sp. AF38-1
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Coprococcus sp. AF38-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Coprococcus sp. AF38-1 AF38-1.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

921978 bp

Thymine Count

882078 bp

Guanine Count

732455 bp

Cytosine Count

669877 bp

Genome Length

3206640 bp

Protein-coding Genes

2764 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ylbf family regulatorDW025_05245Not AvailablePositive1100304 - 110065113956.5
hypothetical proteinDW025_05250Not AvailablePositive1100697 - 110113715896.6
o-methyltransferaseDW025_05255Not AvailablePositive1101153 - 110179424357.3
u32 family peptidaseDW025_05260Not AvailablePositive1101820 - 110304946716.2
sigma-70 family rna polymerase sigma factorDW025_05265Not AvailableNegative1103069 - 110368922947.0
type ii secretion system protein gspeDW025_05270Not AvailablePositive1103974 - 110571662778.1
type iv pilus twitching motility protein piltDW025_05275Not AvailablePositive1105791 - 110685238770.8
type ii secretion system f family proteinDW025_05280Not AvailablePositive1107073 - 110828143775.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinDW025_05285Not AvailablePositive1108517 - 110893614801.5
type iv pilus assembly protein pilmDW025_05290Not AvailablePositive1109475 - 111108859086.0

Displaying genes 1081 – 1090 of 2848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.