Subdoligranulum sp. AM16-9

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. AM16-9 is a Gram-positive bacterium characterized by having a single replicon. This organism has been cataloged under the accession number QVGL00000000.1, which provides a reference for its genomic data. The Gram-positive classification indicates that Subdoligranulum sp. AM16-9 possesses a thick peptidoglycan layer in its cell wall, a trait typical of this group of bacteria. These characteristics often correlate with specific ecological niches and metabolic capabilities, which may influence the bacterium's role in its environment. Given its classification and genomic information, Subdoligranulum sp. AM16-9 may be involved in various biological processes, potentially contributing to nutrient cycling or other ecological functions. However, without additional data on its metabolic pathways or ecological interactions, direct conclusions about its specific ecological role cannot be made. Nonetheless, the Gram-positive nature of the bacterium suggests it may play a significant part in environments where such organisms thrive, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. AM16-9
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. AM16-9 AM16-9.Scaf141, whole genome shotgun

Gene Summary

Adenine Count

877836 bp

Thymine Count

881092 bp

Guanine Count

1136455 bp

Cytosine Count

1157222 bp

Genome Length

4053912 bp

Protein-coding Genes

3729 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinDW194_11525Not AvailableNegative2377608 - 237986383815.2
sugar abc transporter permeaseDW194_11530Not AvailablePositive2380063 - 238104036721.3
carbohydrate abc transporter permeaseDW194_11535Not AvailablePositive2381066 - 238196833620.2
extracellular solute-binding proteinDW194_11540Not AvailablePositive2382023 - 238330647300.7
hypothetical proteinDW194_11545Not AvailablePositive2383367 - 238366011083.8
gfo/idh/moca family oxidoreductaseDW194_11550Not AvailablePositive2383736 - 238477639060.6
sugar phosphate isomerase/epimeraseDW194_11555Not AvailablePositive2384791 - 238560631513.1
hypothetical proteinDW194_11560Not AvailablePositive2385621 - 238709354519.3
hypothetical proteinDW194_11565Not AvailablePositive2387192 - 238791126777.3
gfo/idh/moca family oxidoreductaseDW194_11570Not AvailablePositive2388038 - 238907238476.2

Displaying genes 2391 – 2400 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.