Subdoligranulum sp. AM16-9

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. AM16-9 is a Gram-positive bacterium characterized by having a single replicon. This organism has been cataloged under the accession number QVGL00000000.1, which provides a reference for its genomic data. The Gram-positive classification indicates that Subdoligranulum sp. AM16-9 possesses a thick peptidoglycan layer in its cell wall, a trait typical of this group of bacteria. These characteristics often correlate with specific ecological niches and metabolic capabilities, which may influence the bacterium's role in its environment. Given its classification and genomic information, Subdoligranulum sp. AM16-9 may be involved in various biological processes, potentially contributing to nutrient cycling or other ecological functions. However, without additional data on its metabolic pathways or ecological interactions, direct conclusions about its specific ecological role cannot be made. Nonetheless, the Gram-positive nature of the bacterium suggests it may play a significant part in environments where such organisms thrive, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. AM16-9
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. AM16-9 AM16-9.Scaf141, whole genome shotgun

Gene Summary

Adenine Count

877836 bp

Thymine Count

881092 bp

Guanine Count

1136455 bp

Cytosine Count

1157222 bp

Genome Length

4053912 bp

Protein-coding Genes

3729 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
division/cell wall cluster transcriptional repressor mrazDW194_10190Not AvailablePositive2131517 - 213193615928.1
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDW194_10195Not AvailablePositive2131940 - 213286332953.7
hypothetical proteinDW194_10200Not AvailablePositive2133095 - 213356817687.2
pasta domain-containing proteinDW194_10205Not AvailablePositive2133714 - 213606284188.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDW194_10210Not AvailablePositive2136118 - 213756652316.9
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDW194_10215Not AvailablePositive2137605 - 213897547986.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseDW194_10220Not AvailablePositive2139246 - 214025936016.3
putative lipid ii flippase ftswDW194_10225Not AvailablePositive2140326 - 214149242021.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDW194_10230Not AvailablePositive2141620 - 214274439926.8
udp-n-acetylglucosamine 1-carboxyvinyltransferaseDW194_10235Not AvailablePositive2142837 - 214410243376.7

Displaying genes 2161 – 2170 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.