Subdoligranulum sp. AM16-9

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. AM16-9 is a Gram-positive bacterium characterized by having a single replicon. This organism has been cataloged under the accession number QVGL00000000.1, which provides a reference for its genomic data. The Gram-positive classification indicates that Subdoligranulum sp. AM16-9 possesses a thick peptidoglycan layer in its cell wall, a trait typical of this group of bacteria. These characteristics often correlate with specific ecological niches and metabolic capabilities, which may influence the bacterium's role in its environment. Given its classification and genomic information, Subdoligranulum sp. AM16-9 may be involved in various biological processes, potentially contributing to nutrient cycling or other ecological functions. However, without additional data on its metabolic pathways or ecological interactions, direct conclusions about its specific ecological role cannot be made. Nonetheless, the Gram-positive nature of the bacterium suggests it may play a significant part in environments where such organisms thrive, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. AM16-9
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. AM16-9 AM16-9.Scaf141, whole genome shotgun

Gene Summary

Adenine Count

877836 bp

Thymine Count

881092 bp

Guanine Count

1136455 bp

Cytosine Count

1157222 bp

Genome Length

4053912 bp

Protein-coding Genes

3729 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas2DW194_10140Not AvailableNegative2123469 - 212377711666.3
type ii crispr-associated endonuclease cas1DW194_10145Not AvailableNegative2123782 - 212475635294.2
type ii crispr rna-guided endonuclease cas9DW194_10150Not AvailableNegative2124701 - 2127955122096.0
Trna-glnNot AvailableNot AvailablePositive2128397 - 2128472Not Available
Trna-hisNot AvailableNot AvailablePositive2128524 - 2128599Not Available
Trna-argNot AvailableNot AvailablePositive2128606 - 2128682Not Available
transketolaseDW194_10170Not AvailablePositive2128867 - 212968529650.4
transketolase family proteinDW194_10175Not AvailablePositive2129678 - 213061032673.2
hypothetical proteinDW194_10180Not AvailablePositive2130789 - 21309777189.31
hypothetical proteinDW194_10185Not AvailablePositive2131059 - 213147214837.0

Displaying genes 2151 – 2160 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.