Subdoligranulum sp. AM16-9

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. AM16-9 is a Gram-positive bacterium characterized by having a single replicon. This organism has been cataloged under the accession number QVGL00000000.1, which provides a reference for its genomic data. The Gram-positive classification indicates that Subdoligranulum sp. AM16-9 possesses a thick peptidoglycan layer in its cell wall, a trait typical of this group of bacteria. These characteristics often correlate with specific ecological niches and metabolic capabilities, which may influence the bacterium's role in its environment. Given its classification and genomic information, Subdoligranulum sp. AM16-9 may be involved in various biological processes, potentially contributing to nutrient cycling or other ecological functions. However, without additional data on its metabolic pathways or ecological interactions, direct conclusions about its specific ecological role cannot be made. Nonetheless, the Gram-positive nature of the bacterium suggests it may play a significant part in environments where such organisms thrive, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. AM16-9
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. AM16-9 AM16-9.Scaf141, whole genome shotgun

Gene Summary

Adenine Count

877836 bp

Thymine Count

881092 bp

Guanine Count

1136455 bp

Cytosine Count

1157222 bp

Genome Length

4053912 bp

Protein-coding Genes

3729 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spfh/band 7/phb domain proteinDW194_09570Not AvailableNegative2007590 - 200848032937.3
nfed family proteinDW194_09575Not AvailableNegative2008545 - 200899115565.2
zinc ribbon domain-containing proteinDW194_09580Not AvailablePositive2009547 - 201103453717.6
glycoside hydrolase family 13 proteinDW194_09585Not AvailableNegative2011127 - 201294469161.4
glycogen/starch/alpha-glucan family phosphorylaseDW194_09590Not AvailableNegative2013037 - 201545190636.3
cell division protein zapaDW194_09595Not AvailablePositive2015673 - 201601412488.9
u32 family peptidaseDW194_09600Not AvailablePositive2016014 - 201809274053.2
hypothetical proteinDW194_09605Not AvailableNegative2018089 - 20183107861.64
dutp diphosphataseDW194_09610Not AvailablePositive2018471 - 201891415223.5
duf4321 domain-containing proteinDW194_09615Not AvailablePositive2018930 - 20191969620.22

Displaying genes 2041 – 2050 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.