Subdoligranulum sp. AM16-9

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Subdoligranulum

Description

Subdoligranulum sp. AM16-9 is a Gram-positive bacterium characterized by having a single replicon. This organism has been cataloged under the accession number QVGL00000000.1, which provides a reference for its genomic data. The Gram-positive classification indicates that Subdoligranulum sp. AM16-9 possesses a thick peptidoglycan layer in its cell wall, a trait typical of this group of bacteria. These characteristics often correlate with specific ecological niches and metabolic capabilities, which may influence the bacterium's role in its environment. Given its classification and genomic information, Subdoligranulum sp. AM16-9 may be involved in various biological processes, potentially contributing to nutrient cycling or other ecological functions. However, without additional data on its metabolic pathways or ecological interactions, direct conclusions about its specific ecological role cannot be made. Nonetheless, the Gram-positive nature of the bacterium suggests it may play a significant part in environments where such organisms thrive, potentially influencing microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusSubdoligranulum
SpeciesSubdoligranulum sp. AM16-9
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Subdoligranulum sp. AM16-9 AM16-9.Scaf141, whole genome shotgun

Gene Summary

Adenine Count

877836 bp

Thymine Count

881092 bp

Guanine Count

1136455 bp

Cytosine Count

1157222 bp

Genome Length

4053912 bp

Protein-coding Genes

3729 genes

Non-Coding Genes

186 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orotate phosphoribosyltransferaseDW194_09420Not AvailablePositive1972765 - 197335821557.3
carbamoyl-phosphate synthase small subunitDW194_09425Not AvailablePositive1973391 - 197448239383.2
carbamoyl-phosphate synthase large subunitDW194_09430Not AvailablePositive1974484 - 1977702117448.0
hypothetical proteinDW194_09435Not AvailableNegative1977745 - 197834122414.7
hypothetical proteinDW194_09440Not AvailablePositive1978479 - 197899719717.3
dead/deah box helicaseDW194_09445Not AvailablePositive1979142 - 198028142819.6
xre family transcriptional regulatorDW194_09450Not AvailableNegative1980331 - 19805768890.82
abrb/maze/spovt family dna-binding domain-containing proteinDW194_09455Not AvailablePositive1980685 - 198098410713.3
glutamine synthetase type iiiDW194_09460Not AvailableNegative1981028 - 198311576657.4
hypothetical proteinDW194_09465Not AvailablePositive1983581 - 198467540495.2

Displaying genes 2011 – 2020 of 3915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.