Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | D0A42_00010 | Not Available | Negative | 762 - 1412 | 24009.4 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2146 - 5044 | Not Available |
| transmembrane repetitive protein | D0A42_00015 | Not Available | Negative | 1541 - 3187 | 57620.4 |
| fe-s biogenesis protein nfua | D0A42_00020 | Not Available | Negative | 3303 - 3902 | 21157.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | D0A42_00025 | Not Available | Positive | 3995 - 4351 | 13200.7 |
| energy transducer tonb | D0A42_00030 | Not Available | Positive | 4348 - 4770 | 14616.6 |
| zinc transporter zupt | D0A42_00035 | Not Available | Positive | 4898 - 5716 | 28652.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5163 - 5277 | Not Available |
| rlua family pseudouridine synthase | D0A42_00040 | Not Available | Negative | 6101 - 7084 | 35933.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 7144 - 7218 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

