Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | D0A42_00945 | Not Available | Positive | 195180 - 196850 | 58503.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 196376 - 196448 | Not Available |
| phytoene/squalene synthase family protein | D0A42_00950 | Not Available | Negative | 196913 - 197602 | 25733.6 |
| phosphoglycolate phosphatase | D0A42_00955 | Not Available | Negative | 197631 - 198296 | 24076.3 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | D0A42_00960 | Not Available | Negative | 198409 - 199128 | 26038.4 |
| trz/atz family hydrolase | D0A42_00965 | Not Available | Negative | 199157 - 200506 | 48516.0 |
| hypothetical protein | D0A42_00970 | Not Available | Negative | 200512 - 201357 | 29621.2 |
| elongation factor p | D0A42_00975 | Not Available | Negative | 201363 - 201929 | 20834.8 |
| ef-p beta-lysylation protein epmb | D0A42_00980 | Not Available | Positive | 202031 - 203059 | 37074.8 |
| ggdef domain-containing protein | D0A42_00985 | Not Available | Negative | 203326 - 205443 | 76977.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

