Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0A42_00845 | Not Available | Negative | 177220 - 177735 | 19292.4 |
| cysteine--trna ligase | D0A42_00850 | Not Available | Positive | 177885 - 179324 | 52045.7 |
| sufe family protein | D0A42_00860 | Not Available | Positive | 179599 - 180036 | 16166.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 179856 - 179930 | Not Available |
| mfs transporter | D0A42_00865 | Not Available | Positive | 180033 - 181283 | 43652.6 |
| hypothetical protein | D0A42_00875 | Not Available | Negative | 181817 - 182335 | 18219.8 |
| rna polymerase-binding protein dksa | D0A42_00885 | Not Available | Negative | 182724 - 183749 | 36190.3 |
| membrane protein insertion efficiency factor yidd | D0A42_00890 | Not Available | Positive | 183840 - 184121 | 10381.8 |
| dihydroorotase | D0A42_00895 | Not Available | Positive | 184118 - 185467 | 49163.5 |
| m23 family peptidase | D0A42_00900 | Not Available | Positive | 185407 - 186312 | 31625.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

