Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme abc exporter atp-binding protein ccma | D0A42_00680 | Not Available | Positive | 145179 - 145823 | 22942.1 |
| heme exporter protein ccmb | D0A42_00685 | Not Available | Positive | 145820 - 146515 | 23998.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 146050 - 146126 | Not Available |
| heme abc transporter permease | D0A42_00690 | Not Available | Positive | 146592 - 147341 | 27898.5 |
| heme exporter protein ccmd | D0A42_00695 | Not Available | Positive | 147338 - 147508 | 6614.29 |
| cytochrome c biogenesis protein ccme | D0A42_00700 | Not Available | Positive | 147505 - 147963 | 16909.5 |
| heme lyase ccmf/nrfe family subunit | D0A42_00705 | Not Available | Positive | 148087 - 150024 | 69809.5 |
| dsbe family thiol:disulfide interchange protein | D0A42_00710 | Not Available | Positive | 150017 - 150619 | 21910.6 |
| cytochrome c-type biogenesis protein ccmh | D0A42_00715 | Not Available | Positive | 150640 - 151050 | 15432.6 |
| tetratricopeptide repeat protein | D0A42_00720 | Not Available | Positive | 151044 - 152063 | 36324.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

