Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | D0A42_00550 | Not Available | Negative | 114107 - 114418 | 11403.8 |
| 30s ribosomal protein s1 | D0A42_00555 | Not Available | Negative | 114508 - 116187 | 61539.1 |
| (d)cmp kinase | D0A42_00560 | Not Available | Negative | 116372 - 117052 | 24079.8 |
| 50s ribosomal protein l36 | D0A42_00565 | Not Available | Positive | 117225 - 117350 | 4872.19 |
| hypothetical protein | D0A42_00570 | Not Available | Positive | 117553 - 117882 | 12127.6 |
| agmatine deiminase family protein | D0A42_00575 | Not Available | Positive | 118075 - 119118 | 38004.9 |
| acyltransferase | D0A42_00580 | Not Available | Positive | 119197 - 120081 | 32515.6 |
| n-acetyltransferase | D0A42_00585 | Not Available | Positive | 120088 - 120615 | 19115.8 |
| trab/gumn family protein | D0A42_00590 | Not Available | Positive | 120608 - 121840 | 44297.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 121129 - 121203 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

