Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter permease | D0A42_03850 | Not Available | Negative | 858488 - 859429 | 34169.1 |
| tonb-dependent receptor | D0A42_03855 | Not Available | Negative | 859526 - 862669 | 113049.0 |
| hypothetical protein | D0A42_03860 | Not Available | Positive | 863170 - 863409 | 7979.47 |
| m1 family peptidase | D0A42_03865 | Not Available | Negative | 863406 - 865088 | 63035.1 |
| hypothetical protein | D0A42_03870 | Not Available | Negative | 865164 - 865448 | 9791.9 |
| redox-sensitive transcriptional activator soxr | D0A42_03875 | Not Available | Negative | 865479 - 865925 | 16361.8 |
| mfs transporter | D0A42_03880 | Not Available | Positive | 866029 - 867399 | 46201.5 |
| is5/is1182 family transposase | D0A42_03885 | Not Available | Positive | 868118 - 868204 | 3606.42 |
| ygcg family protein | D0A42_03890 | Not Available | Negative | 868205 - 869047 | 29190.4 |
| lema family protein | D0A42_03895 | Not Available | Negative | 869388 - 870008 | 23092.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

