Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | D0A42_03685 | Not Available | Positive | 826768 - 827769 | 34715.0 |
| phenylphosphate carboxylase subunit delta | D0A42_03690 | Not Available | Positive | 827818 - 828366 | 19544.4 |
| lps export abc transporter periplasmic protein lptc | D0A42_03695 | Not Available | Positive | 828363 - 828938 | 21265.2 |
| lipopolysaccharide transport periplasmic protein lpta | D0A42_03700 | Not Available | Positive | 828916 - 829452 | 19044.8 |
| lps export abc transporter atp-binding protein | D0A42_03705 | Not Available | Positive | 829452 - 830171 | 26044.8 |
| rna polymerase factor sigma-54 | D0A42_03710 | Not Available | Positive | 830211 - 831647 | 52389.3 |
| ribosome-associated translation inhibitor raia | D0A42_03715 | Not Available | Positive | 831735 - 832052 | 12080.5 |
| pts sugar transporter subunit iia | D0A42_03720 | Not Available | Positive | 832074 - 832532 | 16341.7 |
| hpr kinase/phosphorylase | D0A42_03725 | Not Available | Positive | 832529 - 833479 | 35156.5 |
| rnase adapter rapz | D0A42_03730 | Not Available | Positive | 833500 - 834348 | 32066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

