Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | D0A42_03635 | Not Available | Negative | 818343 - 819509 | 42464.5 |
| duf2066 domain-containing protein | D0A42_03640 | Not Available | Negative | 819506 - 820669 | 41087.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | D0A42_03645 | Not Available | Positive | 820748 - 821773 | 35780.2 |
| hypothetical protein | D0A42_03650 | Not Available | Positive | 821790 - 822248 | 16418.6 |
| phosphoribosylglycinamide formyltransferase | D0A42_03655 | Not Available | Positive | 822283 - 822936 | 23016.8 |
| duf3108 domain-containing protein | D0A42_03660 | Not Available | Positive | 823000 - 823797 | 29068.5 |
| duf3108 domain-containing protein | D0A42_03665 | Not Available | Positive | 823801 - 824484 | 24832.9 |
| ef-hand domain-containing protein | D0A42_03670 | Not Available | Negative | 824779 - 825102 | 12118.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | D0A42_03675 | Not Available | Negative | 825099 - 826373 | 44447.8 |
| bola family transcriptional regulator | D0A42_03680 | Not Available | Negative | 826487 - 826714 | 8027.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

