Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | D0A42_03485 | Not Available | Positive | 792261 - 792683 | 14589.3 |
| m23 family peptidase | D0A42_03490 | Not Available | Positive | 792827 - 793417 | 20985.4 |
| duf3861 family protein | D0A42_03495 | Not Available | Positive | 793495 - 793818 | 12379.0 |
| hypothetical protein | D0A42_03500 | Not Available | Positive | 793872 - 794411 | 18735.2 |
| duf1439 domain-containing protein | D0A42_03505 | Not Available | Positive | 794622 - 795218 | 20865.2 |
| type 1 glutamine amidotransferase | D0A42_03510 | Not Available | Negative | 795319 - 795861 | 19190.5 |
| set domain-containing protein-lysine n-methyltransferase | D0A42_03515 | Not Available | Negative | 795969 - 796436 | 17443.6 |
| suf system fe-s cluster assembly regulator | D0A42_03520 | Not Available | Positive | 796610 - 797068 | 16206.7 |
| fe-s cluster assembly protein sufb | D0A42_03525 | Not Available | Positive | 797084 - 798541 | 53967.1 |
| fe-s cluster assembly atpase sufc | D0A42_03530 | Not Available | Positive | 798706 - 799470 | 27654.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

