Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas campestris |
| Strain | pv. campestris strain WHRI8960 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Brassica oleracea var. capitata, Arabidopsis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
863808 bp
Thymine Count
855945 bp
Guanine Count
1607689 bp
Cytosine Count
1615702 bp
Genome Length
4943363 bp
Protein-coding Genes
4114 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | D0A42_03070 | Not Available | Negative | 696651 - 697088 | 14897.4 |
| lysr family transcriptional regulator | D0A42_03075 | Not Available | Positive | 697291 - 698205 | 33440.2 |
| aldo/keto reductase | D0A42_03080 | Not Available | Negative | 698533 - 699516 | 35344.2 |
| tetr/acrr family transcriptional regulator | D0A42_03085 | Not Available | Negative | 699788 - 700477 | 24597.3 |
| efflux transporter outer membrane subunit | D0A42_03090 | Not Available | Negative | 700503 - 701996 | 53176.9 |
| efflux rnd transporter permease subunit | D0A42_03095 | Not Available | Negative | 701998 - 705132 | 112087.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0A42_03100 | Not Available | Negative | 705148 - 706347 | 41513.8 |
| tetr/acrr family transcriptional regulator | D0A42_03105 | Not Available | Positive | 706478 - 707095 | 22405.8 |
| transcriptional repressor | D0A42_03110 | Not Available | Negative | 707895 - 708413 | 18829.4 |
| glutamate--trna ligase | D0A42_03115 | Not Available | Negative | 708427 - 709830 | 51986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Black rot of cabbage | Causes | PMC8042644 |
| Black rot | Causes | PMC8042644 |
| Black rot | Causes | PMC13117714 |
| Bacterial spot disease | Causes | PMC8465007 |
| Black rot | Causes | PMC10335992 |
| Black-rot disease of cruciferous crops | Causes | PMC5488342 |
| Black-rot disease | Causes | PMC5488342 |

